Table 2 |
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|
Summary of results |
||
|
Factor |
Alternatives |
|
|
Better |
Worse |
|
|
|
||
|
1. Gene sets |
Genuine |
Random |
|
2. Ranking algo |
Global |
SAM-GS, GSEA |
|
3. Sets forming features |
high ranking, 1:10 (best ten sets) |
low ranking, 1 (best set) |
|
4. Aggregation* |
SetSig, SVD |
AVG |
|
|
||
|
See Section Main Results for details on how the conclusions were determined. *Difference not significant if Factor 3 is 1:10. |
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|
Holec et al. BMC Bioinformatics 2012 13(Suppl 10):S15 doi:10.1186/1471-2105-13-S10-S15 |
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