Table 3 |
||||||
Analysis of variance for a mixed effect design in coding sequence modeling | ||||||
Sum of squares | DF | Mean squares | F-value | p-value | ||
Method | 0.19 | 1 | 0.189 | 92.92 | p < 0.001 | |
Sequence | 0.08 | 2 | 0.040 | 19.53 | p < 0.001 | |
Method:Sequence | 0.08 | 2 | 0.038 | 18.66 | p < 0.001 | |
Species | 0.10 | 11 | 0.009 | 4.45 | p < 0.001 | |
Residual | 0.11 | 55 | 0.01 |
Analysis of variance for transformed performance (see Method section) as an effect of Method (IMM or CPPLS), Sequence (sequence representation DNA, protein, codon) and their interaction Method:Sequence. The estimated standard deviation of the random effect of Species is = 0.077 and for the Residual = 0.049.
Mehmood et al.
Mehmood et al. BMC Bioinformatics 2012 13:97 doi:10.1186/1471-2105-13-97