Table 5

Assembly of error-containing reads
N50 (bp) NG50 (bp)
RJ SGA RJ SGA
Ecoli-without-errors 54948 54936 57213 57210
Ecoli-with-errors 203 5110 245 8645
Ecoli-SGA-corrected 38178 40002 39999 40824
Ecoli-SGA-corrected+filtered 41872 41872 41905 41903

N50 and NG50 values for the Readjoiner and SGA assemblies of Ecoli-without-errors, Ecoli-with-errors, Ecoli-SGA-corrected and Ecoli-SGA-corrected+filtered.

Gonnella and Kurtz

Gonnella and Kurtz BMC Bioinformatics 2012 13:82   doi:10.1186/1471-2105-13-82

Open Data