Table 2

Data characteristized by sequencing center and population
SC
CEU CHB JPT TSI YRI
Number of samples 18 14 9 51 14
Male/Female 9/9 5/9 5/4 24/27 2/12
Average read depth per gene 1679 1701 1597 1617 1865
Read length 36 36 36 36 36
BCM
CEU CHB CHD JPT LWK YRI
Number of samples 40 62 78 16 108 45
Male/Female 20/20 15/47 38/40 5/11 51/57 22/23
Average read depth per gene 178 131 171 243 128 165
Read length 258 323 339 300 336 322
BI
CEU CHB CHD JPT YRI
Number of samples 16 13 28 34 19
Male/Female 9/7 11/2 12/16 16/18 12/7
Average read depth per gene 1623 1631 1675 1104 1612
Read length 73 75 74 75 76

Population abbreviations:

CEU – Utah residents with Northern and Western European ancestry.

CHB – Han Chinese in Beijing.

CHD – Chinese in Denver, Colorado.

JPT – Japanese in Tokyo, Japan.

LWK – Luhya in Webuye, Kenya.

TSI – Toscans in Italy.

YRI – Yoruba in Ibadan, Nigeria.

Wu et al.

Wu et al. BMC Bioinformatics 2012 13:305   doi:10.1186/1471-2105-13-305

Open Data