Table 4

Comparison of the present work with previously published algorithms, ASTRAL30
Algorithm1 1-domain 2-domain 3-domain 4-domain Overall2
SS Algorithm 75% 60% 47% 34% 70%
CA Algorithm 75% 58% 46% 33% 69%
DDomain 83% 58% 43% 44% 76%
DomainParser2 80% 56% 49% 25% 73%
PDP 74% 62% 49% 46% 70%
Random (see text) 76% 15% 2% 0% 60%

Present work compared to DDomain [12] (using AUTHORS parameters), DomainParser2 [13] and PDP [11]. 1CA refers to the α-carbon based algorithm and SS the secondary structure based one. 2Total, regardless of number of domains.

Feldman

Feldman BMC Bioinformatics 2012 13:286   doi:10.1186/1471-2105-13-286

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