Table 2

CPU times for clustering artificial community
Function CPU time (seconds)
kmerdist 74.80
needledist 924.68
Total 1002.68
N-W alignments 97.81
read p-values 58.84
Total 296.64
ESPRIT+DADA 1.30×103
AmpliconNoise 7.57×104

The CPU times for a few significant subroutines within DADA and ESPRIT as well as their total CPU times.

Rosen et al.

Rosen et al. BMC Bioinformatics 2012 13:283   doi:10.1186/1471-2105-13-283

Open Data