Additional file 6.

Figure S4. Functional enrichment analysis of the 57 genes and the 94 genes in Ingenuity® Pathway Analysis. (a) Comparison of enrichment in Bio Functions between the two gene lists. (b) Comparison of enrichment in Canonical Pathways between the two gene lists. The height of each bar in (a) and (b) represents the logartihm (10-based) transformed p-values calculated from Fisher’s exact test. In (a), the horizontal yellow line is the threshold [i.e., -log10(0.05)] above which bars (p-values) were considered significant; in (b), there is no bar above the threshold which is not shown here. (Figure S4 is located in a separate PDF file: “Fig. S4.pdf”.)

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Li et al. BMC Bioinformatics 2012 13:271   doi:10.1186/1471-2105-13-271