Table 2

Number of pre-miRNAs, TE-derived pre-miRNAs and mis-annotated pre-miRNAs in the six genomes
Frog Human Mouse Nematode Rat Sea squirt
1 similar hit pre-miRNA 150 999 480 182 331 275
and TE-derived 0 101 50 2 19 8
1 chromosome mis-annotated 1 101 35 1 26 0
several similar hits pre-miRNA 0 47 9 7 4 0
and TE-derived 0 6 0 0 0 0
1 chromosome mis-annotated 0 4 5 0 0 0
several similar hits pre-miRNA 32 81 53 11 24 35
and TE-derived 3 45 60 3 2 11
several chromosomes mis-annotated 0 130 28 1 2 2

Number of pre-miRNAs, TE-derived pre-miRNAs and mis-annotated pre-miRNAs in function of the number of similar hits and chromosomes, in frog, human, mouse, nematode, rat, and sea squirt genomes.

Tempel et al.

Tempel et al. BMC Bioinformatics 2012 13:246   doi:10.1186/1471-2105-13-246

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