Table 2 |
|||||||
| Number of pre-miRNAs, TE-derived pre-miRNAs and mis-annotated pre-miRNAs in the six genomes | |||||||
| Frog | Human | Mouse | Nematode | Rat | Sea squirt | ||
| 1 similar hit | pre-miRNA | 150 | 999 | 480 | 182 | 331 | 275 |
| and | TE-derived | 0 | 101 | 50 | 2 | 19 | 8 |
| 1 chromosome | mis-annotated | 1 | 101 | 35 | 1 | 26 | 0 |
| several similar hits | pre-miRNA | 0 | 47 | 9 | 7 | 4 | 0 |
| and | TE-derived | 0 | 6 | 0 | 0 | 0 | 0 |
| 1 chromosome | mis-annotated | 0 | 4 | 5 | 0 | 0 | 0 |
| several similar hits | pre-miRNA | 32 | 81 | 53 | 11 | 24 | 35 |
| and | TE-derived | 3 | 45 | 60 | 3 | 2 | 11 |
| several chromosomes | mis-annotated | 0 | 130 | 28 | 1 | 2 | 2 |
Number of pre-miRNAs, TE-derived pre-miRNAs and mis-annotated pre-miRNAs in function of the number of similar hits and chromosomes, in frog, human, mouse, nematode, rat, and sea squirt genomes.
Tempel et al. BMC Bioinformatics 2012 13:246 doi:10.1186/1471-2105-13-246
