Table 5

Proxy-Analysis of rs7903146 (TCF7L2)
Studya SNP/proxy-SNP Chr Position EAb OAc βd see Pf LDg
1 rs7903146 10 114758349 A G 0.39 0.09 1.5×10−05 -
2 rs7903146 10 114758349 A G 0.68 0.20 7.0×10−04 -
3 rs7903146 10 114758349 A G 0.40 0.13 3.0×10−03 -
4 rs7903146 10 114758349 A G 0.44 0.08 1.6×10−07 -
5 rs4506565 10 114756041 T A 0.20 0.05 2.0×10−04 0.945
6 rs4506565 10 114756041 T A 0.30 0.06 3.8×10−04 0.945
Meta-Analysis rs7903146 10 114758349 A G 0.31 0.03 1.5×10−22 -

aEnumeration according to Table 1.

bEffect allele: the allele beta is given for.

cOther allele.

dEffect estimate according to logistic regression.

eStandard error.

fp-value.

gbetween SNP and proxy-SNP according to reference data (1,000 Genomes).

Meesters et al.

Meesters et al. BMC Bioinformatics 2012 13:231   doi:10.1186/1471-2105-13-231

Open Data