Table 3

Evaluation of segmentation combinations for both strand of chromosome 1
Integrative transcriptional analysis
Method PPV Forward Sensitivity Forward PPV Reverse Sensitivity Reverse
PMSW 0.6511 0.5873 0.5811 0.2073
SCM 0.7188 0.4390 0.6968 0.2146
ZCL 0.8675 0.3821 0.8220 0.2208
PMSW ⋂ SCM ⋂ ZCL 0.6312 0.5984 0.5441 0.2030
PMSW ⋂ ZCL 0.6448 0.5921 0.5744 0.2076
PMSW ⋂ SCM 0.6370 0.5957 0.5504 0.2043
SCM ⋂ ZCL 0.7053 0.4409 0.6626 0.2116
Majority voting 0.7247 0.4396 0.6993 0.2164

PPV and sensitivity for both strand of chromosome 1 using individual TAR detection algorithms and the combination of their results.

Segura et al.

Segura et al. BMC Bioinformatics 2012 13:222   doi:10.1186/1471-2105-13-222

Open Data