Illustration of the effectiveness of the MSD method on a case from H3N2 dataset. The effectiveness of the MSD method is illustrated on a single patient from H3N2. In the top panel, a 2-dimensional H3N2 asymptomatic test subject (genes RSAD2 and IFI44L observed at 15 time steps) has been correctly classified by MSD method at the 5th time point. In the bottom panel a 2-dimensional H3N2 symptomatic test subject (genes RSAD2 and IFI44L observed at 16 time steps) has been correctly classified by MSD method at the earliest possible time stamp number 8. Red lines represent time series of the symptomatic subject. Blue lines represent time series of the asymptomatic subject. Shapelets are represents by solid markers.
Ghalwash and Obradovic BMC Bioinformatics 2012 13:195 doi:10.1186/1471-2105-13-195