DNA motif finding problem parameters. In this example, n = 5 sequences of length L = 35 are used to detect a motif of width W = 10. The corresponding PWM, f, is also shown. Note that each sequence has exactly one occurrence of the motif.
Zia and Moses BMC Bioinformatics 2012 13:151 doi:10.1186/1471-2105-13-151