Table 3 |
||||||
| Observed genotype combinations in case/parent trios | ||||||
| Genotypesa | Index of | Index of CEPGb | Index of CPGc | Observed | ||
| gm | gf | gc | combination | parental mating type | parental mating type | count |
| 22 | 22 | 22 | 1 | 1 | 1 | n1 |
| 22 | 12 | 22 | 2 | 2 | 2 | n2 |
| 22 | 12 | 12 | 3 | 2 | 2 | n3 |
| 12 | 22 | 22 | 4 | 2 | 3 | n4 |
| 12 | 22 | 12 | 5 | 2 | 3 | n5 |
| 22 | 11 | 12 | 6 | 3 | 4 | n6 |
| 11 | 22 | 12 | 7 | 3 | 5 | n7 |
| 12 | 12 | 22 | 8 | 4 | 6 | n8 |
| 12 | 12 | 12 | 9 | 4 | 6 | n9 |
| 12 | 12 | 11 | 10 | 4 | 6 | n10 |
| 12 | 11 | 12 | 11 | 5 | 7 | n11 |
| 12 | 11 | 11 | 12 | 5 | 7 | n12 |
| 11 | 12 | 12 | 13 | 5 | 8 | n13 |
| 11 | 12 | 11 | 14 | 5 | 8 | n14 |
| 11 | 11 | 11 | 15 | 6 | 9 | n15 |
agm,gf,gc=genotypes of mother, father, child, respectively.
bCEPG= conditional on exchangeable parental genotypes.
cCPG= conditional on parental genotypes.
Howey and Cordell BMC Bioinformatics 2012 13:149 doi:10.1186/1471-2105-13-149
