Table 1

Average cluster size, average Pearson correlation coefficient (〈r〉) and average clustering coefficients (〈C〉) of hydrophobic (BN), hydrophilic (IN), charged (CN), and all-amino-acids (AN) networks at different length scales viz. the long-range (LRN), short-range (SRN) and all-range (ARN) interaction networks are listed forImin= 0
Length scale Type Avg cluster size r C
LRN BN 101.59 ± 53.66 0.13 ± 0.10 0.24 ± 0.05
IN 44.16 ± 13.03 -0.04 ± 0.19 0.14 ± 0.06
AN 350.5 ± 134.77 0.17 ± 0.07 0.16 ± 0.03
SRN BN 38.55 ± 11.10 -0.11 ± 0.17 0.29 ± 0.08
AN 430.93 ± 145.06 0.21 ± 0.06 0.35 ± 0.03
ARN BN 156.59 ± 70.75 0.27 ± 0.08 0.39 ± 0.03
IN 68.38 ± 41.33 0.15 ± 0.15 0.29 ± 0.06
CN 47.42 ± 18.34 0.14 ± 0.16 0.27 ± 0.07
AN 436.28 ± 141.01 0.30 ± 0.04 0.35 ± 0.01

Sengupta and Kundu

Sengupta and Kundu BMC Bioinformatics 2012 13:142   doi:10.1186/1471-2105-13-142

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