Table 2

Functional enrichments of the identified complexes detected by TSN-PCD and functional modules detected by DFM-CIN, MCL, MCODE, CPM, SPICI, and COACH
Number of Average % of significant Average Significant modules(P)
Algorithms modules size modules (-logP) <E-15 E-15 to E-10 E-10 to E-5 E-5 to 0.001
TSN-PCD 865 26.41 95.95 16.36 39.77%(344) 19.65%(170) 26.24%(227) 10.29%(89)
DFM-CIN 280 18.28 92.14 14.49 30.71%(86) 13.93%(39) 34.64%(97) 12.86%(36)
MCL 619 6.58 59.93 5.07 4.2%(26) 5.00%(31) 20.52%(127) 30.21%(187)
MCODE 50 15.66 92.00 8.53 12.00%(6) 12.00%(6) 50.00%(25) 18.00%(9)
CPM 126 11.59 92.65 11.14 20.63%(26) 14.28%(18) 38.89%(49) 19.84%(25)
SPICI 552 11.59 66.85 5.00 4.71%(26) 3.80%(21) 21.19%(117) 37.14%(205)
COACH 894 8.99 85.57 7.76 10.85%(97) 11.97%(107) 35.79%(320) 26.96%(241)

Li et al.

Li et al. BMC Bioinformatics 2012 13:109   doi:10.1186/1471-2105-13-109

Open Data