Comparison of the number of known complexes matched by the predicted protein complexes by TSN-PCD and other five algorithms MCL, MCODE, CPM, COACH, SPICI. Figure 7 shows the number of matched known complexes with respect to different overlapping scores for different sets generated by TSN-PCD and other five algorithms: MCL, MCODE, CPM, COACH, SPICI. TSN-PCD predicts the protein complexes from dynamic network while the others identify the protein complexes from the static network. The results show that TSN-PCD and COACH can match more known protein complexes than the other algorithms.
Li et al. BMC Bioinformatics 2012 13:109 doi:10.1186/1471-2105-13-109