Table 6 |
||
|
Public software and resources used in the GN task. |
||
|
Step |
Software |
Other Public Resources |
|
|
||
|
1) |
ABNER [26] AIIAGMT [27] BANNER [28] GNAT [29] NERsuite [30] LingPipe [31] |
Entrez Gene [32] Gene and Protein Synonym DataBase (GPSDB) [33] Unified Medical Language System (UMLS) [34] UniProt [35] |
|
|
||
|
2) |
Linnaeus [25] |
NCBI Taxonomy |
|
|
||
|
3) & 4) |
Entrez Gene [32] Lucene [38] |
BioThesaurus [39] GeneRIF annotations Gene Ontology (GO) annotations & predictions [40] MeSH annotations OMIM records |
|
|
||
|
Lu et al. BMC Bioinformatics 2011 12(Suppl 8):S2 doi:10.1186/1471-2105-12-S8-S2 |
||
