Table 5

Top 20 k-mers ranking by different distances on H1 cell line on H3k4me1 dataset

H1 cell line

KL

Bhattacharyya

Hellinger


tcga

tcga

tcga

cgaa

tcca

cgaa

attc

attc

attc

tcca

atgg

tcca

atcg

cgaa

atcg

ggaa

ggaa

ggaa

atgg

aatg

atgg

aatg

atcg

aatg

aacg

tata

aacg

ctta

ttaa

ctta

gcta

ctta

gcta

ttaa

aacg

ttaa

ctaa

gcta

ctaa

agct

taaa

agct

ggta

ggta

ggta

taaa

ataa

cgga

cgga

cgga

taaa

acgg

atta

acgg

ataa

acgg

ataa

atta

aaaa

atta


Pinello et al. BMC Bioinformatics 2011 12:408   doi:10.1186/1471-2105-12-408

Open Data