Table 2

Functional categories with maximum temporal variation

REF

MUT

JOINT


32.01.04

32.01.04

32.01.04

20.09.03

20.09.03

20.09.03

10

16.21

16.21

16.21

32.05.05

11.04.02

11.04.02

10

10

32.05.05

11.04.02

12

20.01.27

40.01.05

32.05.05

30

30

30

16.03.03

10.01.09

16.03.03

20.09.07

10.03.01

32.07

12

14.13.01

20.09.07

32.07

20.01.10

40.01.03

20.01.15

16.03.03

20.01.27

42.04.05

20.09.07

10.01.09

34.07.02

42.04.03

34.07.02

10.03.01

16

32.07.07

40.01.03

34.07.02

16.02

10.01.09

12.01.01

42.04.05

42.29

01.03.01

42.29

32.07.07

32.07.07

14.04


Table 2 shows the MIPS IDs of the top 20 functional categories which show the maximum amount of variation in time for REF or MUT strains, evaluated independently and Jointly using the damping model. This is obtained by considering the total probability of change in the transition probability matrix Qh i.e. . The categories indicated in bold font are those which are known to have been enriched in the original dataset [30].

Jethava et al. BMC Bioinformatics 2011 12:327   doi:10.1186/1471-2105-12-327

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