Table 2 |
||
|
Functional categories with maximum temporal variation |
||
|
REF |
MUT |
JOINT |
|
|
||
|
32.01.04 |
32.01.04 |
32.01.04 |
|
20.09.03 |
20.09.03 |
20.09.03 |
|
10 |
16.21 |
16.21 |
|
16.21 |
32.05.05 |
11.04.02 |
|
11.04.02 |
10 |
10 |
|
32.05.05 |
11.04.02 |
12 |
|
20.01.27 |
40.01.05 |
32.05.05 |
|
30 |
30 |
30 |
|
16.03.03 |
10.01.09 |
16.03.03 |
|
20.09.07 |
10.03.01 |
32.07 |
|
12 |
14.13.01 |
20.09.07 |
|
32.07 |
20.01.10 |
40.01.03 |
|
20.01.15 |
16.03.03 |
20.01.27 |
|
42.04.05 |
20.09.07 |
10.01.09 |
|
34.07.02 |
42.04.03 |
34.07.02 |
|
10.03.01 |
16 |
32.07.07 |
|
40.01.03 |
34.07.02 |
16.02 |
|
10.01.09 |
12.01.01 |
42.04.05 |
|
42.29 |
01.03.01 |
42.29 |
|
32.07.07 |
32.07.07 |
14.04 |
|
|
||
|
Table 2 shows the MIPS IDs of the top 20 functional categories which show the maximum
amount of variation in time for REF or MUT strains, evaluated independently and Jointly
using the damping model. This is obtained by considering the total probability of
change in the transition probability matrix Qh i.e. |
||
|
Jethava et al. BMC Bioinformatics 2011 12:327 doi:10.1186/1471-2105-12-327 |
||
. The categories indicated in bold font are those which are known to have been enriched
in the original dataset 