Figure 3.

Accuracy of four RNA-Seq quantification methods. The percent error distributions of estimates from RSEM, IsoEM, Cufflinks, and rQuant on simulated RNA-Seq data. The error distributions of global isoform and gene estimates from PE data are shown in (A) and (B), respectively. Global isoform and gene estimate error distributions for SE data are shown in (C) and (D), respectively.