Table 8 |
|||
|
A fragment of the text output of this heterogeneous pipeline workflow (see Figure 16) |
|||
|
SamToolsCamldMDtag_1.OutputNo-DuplicatesBAMfile-1.bam.bai (Binary file) |
|||
|
SamToolsCamldMDtag_1.OutputNo-DuplicatesBAMfile-1.bam (Binary file) |
|||
|
... |
|||
|
BowtieEcoli_1.OutputMAPfile-1.map (ASCII file) |
|||
|
r0 |
- gi|110640213|ref|NC_008253.1| |
3658049 |
|
|
ATGCTGGAATGGCGATAGTTGGGTGGGTATCGTTC |
|||
|
45567778999:9;;<===>?@@@@AAAABCCCDE |
0 |
32:T>G,34:G > A |
|
|
r1 |
- gi|110640213|ref|NC_008253.1| |
1902085 |
|
|
CGGATGATTTTTATCCCATGAGACATCCAGTTCGG |
|||
|
45567778999:9;;<===>?@@@@AAAABCCCDE |
0 |
||
|
r2 |
- gi|110640213|ref|NC_008253.1| |
3989609 |
|
|
CATAAAGCAACAGTGTTATACTATAACAATTTTGA |
|||
|
45567778999:9;;<===>?@@@@AAAABCCCDE |
0 |
||
|
r5 |
+ gi|110640213|ref|NC_008253.1| |
4249841 |
|
|
CAGCATAAGTGGATATTCAAAGTTTTGCTGTTTTA |
|||
|
EDCCCBAAAA@@@@?>===<;;9:99987776554 |
0 |
||
|
... |
|||
|
|
|||
|
Dinov et al. BMC Bioinformatics 2011 12:304 doi:10.1186/1471-2105-12-304 |
|||
