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Open Access Highly Accessed Software

An integrated ChIP-seq analysis platform with customizable workflows

Eugenia G Giannopoulou12 and Olivier Elemento12*

Author Affiliations

1 HRH Prince Alwaleed Bin Talal Bin Abdulaziz Alsaud Institute for Computational Biomedicine, Weill Cornell Medical College, 1305 York Avenue, New York, NY, 10021, USA

2 Department of Physiology and Biophysics, Weill Cornell Medical College, 1300 York Avenue, New York, NY, 10021, USA

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BMC Bioinformatics 2011, 12:277  doi:10.1186/1471-2105-12-277

Published: 7 July 2011

Additional files

Additional file 1:

This file describes in detail the quality control analysis tools and the peak detection algorithm, implemented within the ChIPseeqer framework, as well as performance evaluation results for several tools of the framework.

Format: PDF Size: 1MB Download file

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