Additional file 1.

Pairs of yeast proteins with lab-confirmed binding sites. This file contains 265 pairs of interacting yeast proteins, with associated amino acid ranges for the binding sites on each protein, extracted from DOMINO [26], and used as validation data. Each line represents one pair, with the following fields tab-separated: ORF name of protein A, ORF name of protein B, start position of binding site along protein A, end position of binding site along protein A, start position of binding site B, end position of binding site B.

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Amos-Binks et al. BMC Bioinformatics 2011 12:225   doi:10.1186/1471-2105-12-225