Faster Smith-Waterman database searches with inter-sequence SIMD parallelisation
Department of Informatics, University of Oslo, PO Box 1080 Blindern, NO-0316 Oslo, Norway
Centre for Molecular Biology and Neuroscience (CMBN), Department of Microbiology, Rikshospitalet, Oslo University Hospital, PO Box 4950 Nydalen, NO-0424 Oslo, Norway
Sencel Bioinformatics AS, PO Box 180 Vinderen, NO-0319 Oslo, Norway
BMC Bioinformatics 2011, 12:221 doi:10.1186/1471-2105-12-221Published: 1 June 2011
Additional file 1:
Source code. The source code of SWIPE version 1.0, as well as a binary executable for 64-bit Linux and score matrices are included in this gzipped tar archive file.
Format: GZ Size: 56KB Download file