Table 1 |
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Resources in Brunn |
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PlateType |
A PlateType defines the size of a plate. |
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PlateLayout |
A PlateLayout defines which wells are used for dilution series, blank and controls. It also defines all calculation functions. |
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MasterPlate |
A MasterPlate defines which substances with which concentrations are in which wells. |
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Compound |
A Compound is a substance whose effects are of interest. |
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Cell Line |
A Cell Line represents a cultured cell type that is grown outside the body. Can be bred for specific properties such as drug resistance |
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Patient Cell |
A Patient Cell represents tissue samples from a patient. |
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Plate |
A Plate corresponds to a real life plate and is what result data is coupled to. |
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Plates in Brunn are built in a stepwise process where the result of each step is stored in the database as one resource type. |
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Alvarsson et al. BMC Bioinformatics 2011 12:179 doi:10.1186/1471-2105-12-179 |
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