Additional file 4.

Top bi-combinations of selected HMVs features by the TCSR model. Top bi-combinations of selected HMVs features by the TCSR model. The x-axis shows the total number of times in which the two HMV types have been selected as the first and the second most predictive feature in 100 replicates, irrespective of nucleosomes index of the HMV features. The y-axis indicates the combinations of two HMV types in the "first_second" order. A, B) The combinations selected from Set I for CpG- and nonCpG-related promoters, respectively; C, D) combinations selected from Set II for CpG- and nonCpG-related promoters, respectively; E, F) The combinations selected from Set I for CpG- and nonCpG-related gene bodies, respectively; G, H) combinations selected from Set II for CpG- and nonCpG-related gene bodies, respectively.

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Zhang and Zhang BMC Bioinformatics 2011 12:155   doi:10.1186/1471-2105-12-155