Table 2

Overlap between the top 100 or top 1000 differentially expressed genes identified by edgeR on full data and by other statistics on data without replicate

edgeR on full data

Without replicates


ASC

edgeR

DGEseq

Z

Fisher

top 100

33

37

2

1

1

top 1000

260

263

89

82

86


Wu et al. BMC Bioinformatics 2010 11:564   doi:10.1186/1471-2105-11-564

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