Example detection workflow in moses. This simple detection workflow consists of three modules: the first one loads the sequence and annotations from a Genbank file, the second calculates the local GC-content in sliding windows, the third highlights windows, where the GC-content exceeds a certain threshold. In genomes of AT-rich hyperthermophiles, for instance, this simple method allows accurate prediction of ncRNAs.
Raasch et al. BMC Bioinformatics 2010 11:491 doi:10.1186/1471-2105-11-491