Figure 12.

Screenshot of Jalview visualization of reference alignment for dataset BB50012. Jalview screenshot of the consistent partial columns for s_min = 3 among one of the core regions of the BAliBASE reference alignment for dataset BB50012. The partial columns (shown in colour) correspond to parts of correct columns in a sufficient amount to correct the overall behaviour of ClustalW, resulting in a TC score of 44 (instead of 0). Notice the clear separation of the partial columns between eukaryotes and prokaryotes.