Table 1

Some selected bundles of the OpenChrom software.

Bundle

Description


baseline.detector

Detect baselines


comparison

Compare chromatograms and mass spectra


converter

Converter to read binary/textual data files


converter.supplier.agilent

Read Agilent data files


converter.supplier.cdf

Read and write NetCDF data files


...

...


filter

Modify chromatographic data


identifier

Identify chromatograms, mass spectra and peaks


integrator

Integrate peaks


model

Models (chromatogram, mass spectrum, peak,...)


peak.detector

Detect peaks


logging

Logging facility


rcp

Base application


thirdpartylibraries.*

Third party libraries (SWTChart, log4j,...)


...

...


The OpenChrom software offers several extension points. Extension points are declared in bundles. The table shows a selected overview of bundles and suppliers.

Wenig and Odermatt BMC Bioinformatics 2010 11:405   doi:10.1186/1471-2105-11-405

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