Figure 3.

False negative SNP discovery rate for k-base encoding. False negative SNP discovery rate calculated as the fraction of reads that do not call a SNP after alignment when a SNP call is expected. 10, 000 simulated reads from the E. Coli genome were generated.

Homer et al. BMC Bioinformatics 2010 11:347   doi:10.1186/1471-2105-11-347
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