Methodology article
Detecting lateral gene transfers by statistical reconciliation of phylogenetic forests
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* Corresponding author: Vincent Daubin daubin@biomserv.univ-lyon1.fr
Université de Lyon; Université Lyon 1; CNRS; INRIA; UMR 5558, Laboratoire de Biométrie et Biologie Evolutive, 43 boulevard du 11 novembre 1918, F-69622 Villeurbanne, France
BMC Bioinformatics 2010, 11:324 doi:10.1186/1471-2105-11-324
Published: 15 June 2010Additional files
Additional file 1:
The 330 simulated alignments and corresponding gene trees (true and ML) along with the 40-taxa reference species tree.
Format: ZIP Size: 1.6MB Download file
Additional file 2:
True positives (transfer events) with a 0.60 threshold for EEEP, Prunier and RIATA-HGT. For detailed legend see Fig. 2.
Format: PDF Size: 33KB Download file
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Additional file 3:
False positives (transfer events) with a 0.60 threshold for EEEP, Prunier and RIATA-HGT. For detailed legend see Fig. 2.
Format: PDF Size: 6KB Download file
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Additional file 4:
Proportion of correct complete scenarios with a 0.60 threshold for EEEP, Prunier and RIATA-HGT. For detailed legend see Fig. 3.
Format: PDF Size: 24KB Download file
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