BMC Bioinformatics

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Open Access Research article

Automated Alphabet Reduction for Protein Datasets

Jaume Bacardit1,2*, Michael Stout1,2, Jonathan D Hirst3, Alfonso Valencia4, Robert E Smith5 and Natalio Krasnogor1*

Author Affiliations

1 ASAP research group, School of Computer Science, University of Nottingham, Jubilee Campus, Wollaton Road, Nottingham, NG8 1BB, UK

2 MYCIB, School of Biosciences, University of Nottingham, Sutton Bonington, LE12 5RD, UK

3 School of Chemistry, University of Nottingham, University Park, Nottingham, NG7 2RD, UK

4 Spanish National Cancer Research Centre, Melchor Fdez Almagro, 3. 28029 Madrid, Spain

5 Dept. of Computer Science, University College London, Gower Street, London, WC1E 6BT, UK

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BMC Bioinformatics 2009, 10:6 doi:10.1186/1471-2105-10-6

Published: 6 January 2009

Additional files

Additional file 1:

Reduction groups obtained for all the training sets. This document lists 6 tables (3 reduction strategies and two datasets) containing the details of the reduction groups generated by our protocol for each of the ten training sets.

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