Additional file 8.

Repeat Map of Alternating Repeats. Repeat Map showing another example of alternating repeats on Human Chromosome X. Each pixel row of the Repeat Map represents the local alignment of 1380 nucleotides. The map covers over 220,000 nucleotides. The repeats alternate between 5 different patterns: 171, 35, 171, 35, 171, 35, 171, 35, 193, 217, 183/217, 217, 171. This is immediately followed by the unsequenced centromere.

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Seaman and Sanford BMC Bioinformatics 2009 10:452   doi:10.1186/1471-2105-10-452