Additional file 3.
Alu repeats in Skittle. Alu repeat annotations on Human chromosome 19 (left), shown next to the Nucleotide Display and Repeat Map. This annotation track is based upon RepeatMasker. As seen, this section is rich in Alu SINE repeat annotations, which correlate to pixels seen in the Repeat Map around 135 bp, and which reflect the internal repeat structure seen within most Alus. The Annotation Display appears as three lines in this image because annotation entries often overlap each other.
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Seaman and Sanford BMC Bioinformatics 2009 10:452 doi:10.1186/1471-2105-10-452