Table 7 |
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|
Percentage of indexing time overall in the three PLAST programs |
|||||||||
|
program |
PLASTP |
TPLASTN |
PLASTX |
||||||
|
|
|||||||||
|
query bank |
1K |
3K |
10K |
1K |
3K |
10K |
1K |
3K |
10K |
|
Indexing time (1 thread) |
3.0% |
1.6% |
0.3% |
6.5% |
3.5% |
1.4% |
1.2% |
0.4% |
0.1% |
|
Indexing time (8 threads) |
15.8% |
8.9% |
2.1% |
31.6% |
19.9% |
8.9% |
7.5% |
2.9% |
1.0% |
|
|
|||||||||
|
Percentage of indexing time overall in the three PLAST programs with number of threads equal to 1 and 8. |
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|
Nguyen and Lavenier BMC Bioinformatics 2009 10:329 doi:10.1186/1471-2105-10-329 |
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