Table 4

Prediction results for the testing set

Complex

Unbound

No. of Surface Residues

No. of Interface Residues

Sensitivitya

Precisiona

Specificitya

AUC


2ARJ_HL:Q

1NEZ_G

99

18

0.278

0.227

0.790

0.604

2BDN_HL:A

1DOK_A

63

13

0.154

0.095

0.620

0.281

2FD6_HL:U

1YWH_A

225

14

0.500

0.089

0.659

0.617

2GHW_B:A

2GHV_E

148

27

0.519

0.311

0.744

0.727

2H9G_AB:R

1D4V_A

108

18

0.556

0.286

0.722

0.724

2J6E_IMHL:ABb

2DTQ_AB

336

41

0.512

0.202

0.719

0.614

2NR6_CD:A

1YG9_A

233

19

0.947

0.234

0.724

0.870

2NYY_CD:A

2VUA_A

321

24

0.750

0.164

0.690

0.810

2P45_B:A

1KF2_A

104

13

0.154

0.057

0.637

0.553

2Q8B_HL:A

1Z40_A

228

25

0.440

0.147

0.685

0.645

2QQN_HL:A

1KEX_A

118

11

0.636

0.200

0.738

0.737

2R29_HL:A

1OK8_A

317

20

0.300

0.054

0.646

0.567

2R56_HL:A

1GX9_A

131

22

0.091

0.053

0.670

0.409

2UZI_HL:R

2EVW_X

132

21

0.286

0.171

0.739

0.505

3BN9_CD:B

1EAX_A

181

32

0.531

0.279

0.705

0.581

3BQU_CD:AB

2F5A_HL

336

12

1.000

0.098

0.660

0.914

3D85_AB:C

3D87_A

141

19

0.474

0.180

0.664

0.591

Mean

189

20.5

47.8%

16.7

69.5%

0.632


a Sensitivity, precision, and specificity were recorded when 55% of surface residues were predicted as interface residues by the single term. bMultiple binding sites.

Liang et al. BMC Bioinformatics 2009 10:302   doi:10.1186/1471-2105-10-302

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