Two successful examples of antibody binding site prediction (a) SARS spike protein receptor binding domain (2ghv); (b) Cockroach allergen Bla g 2 (1yg9). The antibodies were colored in grey. The surface residues of antigens were colored according to predicted possibility to be an epitope residue (from red to blue in decreasing order) and the core residues were colored in blue.
Liang et al. BMC Bioinformatics 2009 10:302 doi:10.1186/1471-2105-10-302