Table 7 |
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Summary of the 266 6-frame translated genome-mapped peptide clusters1 not confirming existing S. nodorum CDS annotations by either overlap or proximity within 200 bp. |
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In conflicting orientation with existing gene annotation |
113 |
|
No conflict, no supporting evidence |
135 |
|
Overlaps genomic tblastn hit |
18 |
|
Genomic tblastn hit links to an existing gene |
15 |
|
Genomic tblastn hit |
3 |
|
|
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1 Peptide clusters were assessed for orientation conflicts with genes in the opposing strand and for overlap with grouped regions of tblastn homology to related dothideomycete genomes (L. maculans, P. tritici-repentis, C. heterostrophus, A. brassisicola, M. graminicola and M. fijiensis). |
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Bringans et al. BMC Bioinformatics 2009 10:301 doi:10.1186/1471-2105-10-301 |
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