Table 7

Statistics about the comparative performance of GEST classifiers and our label similarity-incorporated classifiers using information in the whole GO biological process ontology, measured in terms of the number of classes for which AUC scores are improved by the latter over the former, and the average and maximum improvement in AUC scores.

Method

Total # classes

# Classes improved

Average improvement over all classes

Maximum improvement


GEST-PK-TS

137

75

0.0235 (3.82%)

0.2171 (42.04%)

GEST-SB-TS

137

77

0.0144 (2.34%)

0.2137 (47.4%)


Pandey et al. BMC Bioinformatics 2009 10:142   doi:10.1186/1471-2105-10-142

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