Table 7

Coincidence between gene association classes and PBCs

Gene association class

Constitutively unmethylated (PI)

Constitutively methylated (PI)

Unmethylated in sperm (PI)

Differentially methylated (PI)


TSS

138

(5.27E-13)

3

3

2

Promoter

118

28

17

15

3'UTR

1

6 (1.2E-03)

1

4

CDS

14

23 (9.29E-08)

7

7

Intron

12

8

0

9 (7.3E-05)

Pseudogene

33

11

14 (7.6E-05)

4

NA

7

5

2

3


Sum (% of total)

323 (65.25)

84 (16.97)

44 (8.89)

44 (8.89)


Only the p-value (PI of significant intersections (< 0.01) is shown and marked in bold.

Previti et al. BMC Bioinformatics 2009 10:116   doi:10.1186/1471-2105-10-116

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