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Open Access Highly Accessed Methodology article

A standard numbering scheme for thiamine diphosphate-dependent decarboxylases

Constantin Vogel1, Michael Widmann1, Martina Pohl2 and Jürgen Pleiss1*

Author Affiliations

1 Institute of Technical Biochemistry, University of Stuttgart, Allmandring 31, Stuttgart, 70569, Germany

2 IBG-1: Biotechnology, Forschungszentrum Jülich GmbH, Jülich, 52425, Germany

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BMC Biochemistry 2012, 13:24  doi:10.1186/1471-2091-13-24

Published: 17 November 2012

Additional files

Additional file 1:

Figures S1 and S2, Tables S1 and S2, Description of the nvw file format.

Format: PDF Size: 516KB Download file

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Open Data

Additional file 2:

nvw file of the pyruvate decarboxylase from S. cerevisiae.

Format: NVW Size: 4KB Download file

Open Data

Additional file 3:

Comparison of alignments generated using the numbering method and T-Coffee.

Format: TXT Size: 26KB Download file

Open Data

Additional file 4:

Reference alignment for the standard numbering method.

Format: ALN Size: 15KB Download file

Open Data