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Focus on Gut Microbiomes

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Welcome to our focus page on gut microbiomes. Here, you will find a selection of articles from Microbiome, Animal Microbiome, Veterinary Research and related journals that pertain to the gut microbiome of humans and animals.

Latest gut microbiome articles

Reduced B12 uptake and increased gastrointestinal formate are associated with archaeome-mediated breath methane emission in humans

Cooperation between host immunity and the gut bacteria is essential for helminth-evoked suppression of colitis

Gut microbiota regulation of P-glycoprotein in the intestinal epithelium in maintenance of homeostasis

Longitudinal study on the effects of growth-promoting and therapeutic antibiotics on the dynamics of chicken cloacal and litter microbiomes and resistomes

Blockage of bacterial FimH prevents mucosal inflammation associated with Crohn’s disease

Host habitat is the major determinant of the gut microbiome of fish

From gut microbiota to host appetite: gut microbiota-derived metabolites as key regulators

Characterisation of the rumen resistome in Spanish dairy cattle

Temporal and nutritional effects on the weaner pig ileal microbiota

Environmentally enriched housing conditions affect pig welfare, immune system and gut microbiota in early life

MAP, Johne’s disease and the microbiome; current knowledge and future considerations

Evolution of rumen and oral microbiota in calves is influenced by age and time of weaning

Salmon gut microbiota correlates with disease infection status: potential for monitoring health in farmed animals

The link between broiler flock heterogeneity and cecal microbiome composition

Typhlitis induced by Histomonas meleagridis affects relative but not the absolute Escherichia coli counts and invasion in the gut in turkeys

Influence of pig gut microbiota on Mycoplasma hyopneumoniae susceptibility

Microencapsulated phages show prolonged stability in gastrointestinal environments and high therapeutic efficiency to treat Escherichia coli O157:H7 infection

Damage to intestinal barrier integrity in piglets caused by porcine reproductive and respiratory syndrome virus infection

Cannabis-derived cannabidiol and nanoselenium improve gut barrier function and affect bacterial enzyme activity in chickens subjected to C. perfringens challenge

Butyrate-mediated autophagy inhibition limits cytosolic Salmonella Infantis replication in the colon of pigs treated with a mixture of Lactobacillus and Bacillus

Bovine milk microbiome: a more complex issue than expected

From Annals of Microbiology

Assessing the genetic impact of Enterococcus faecalis infection on gastric cell line MKN74

Phenotypic features and analysis of genes supporting probiotic action unravel underlying perspectives of Bacillus velezensis VTX9 as a potential feed additive for swine


From Gut Pathogens

The use of biomarkers associated with leaky gut as a diagnostic tool for early intervention in autism spectrum disorder: a systematic review

Gut microbiota influence in type 2 diabetes mellitus (T2DM)

No distinction in the gut microbiota between diarrhea predominant-irritable bowel syndrome and healthy subjects: matched case–control study in Thailand

Gut microbiota of patients with different subtypes of gastric cancer and gastrointestinal stromal tumors

Interplay between severities of COVID-19 and the gut microbiome: implications of bacterial co-infections?

Topical collections

  1. Engineering optimal livestock microbiomes

    Cows eating hay © Image by skeeze from PixabayAnimal Microbiome invites submissions focused on progress in engineering optimal livestock microbiomes so that feed conversion is maximised.


  2. Antimicrobial resistance and the microbiome

    © Image by Arek Socha from PixabayA cross-journal series examining at the spread of antimicrobial resistance genes in the environment.


  3. The microbiota-gut-brain axis

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    This cross-journal collection brings together both human and animal studies covering all aspects of the microbiota-gut-brain axis’ role in health and disease, as well as its therapeutic potential.