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31 result(s) for 'author#Douglas E Soltis' within BMC

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  1. Polyploidy (whole-genome duplication) is an important speciation mechanism, particularly in plants. Gene loss, silencing, and the formation of novel gene complexes are some of the consequences that the new pol...

    Authors: Jennifer A Tate, Prashant Joshi, Kerry A Soltis, Pamela S Soltis and Douglas E Soltis
    Citation: BMC Plant Biology 2009 9:80
  2. Tragopogon mirus and T. miscellus are allotetraploids (2n = 24) that formed repeatedly during the past 80 years in eastern Washington and adjacent Idaho (USA) following the introduction of the diploids T. dubius,...

    Authors: Hana Malinska, Jennifer A Tate, Roman Matyasek, Andrew R Leitch, Douglas E Soltis, Pamela S Soltis and Ales Kovarik
    Citation: BMC Evolutionary Biology 2010 10:291
  3. Next-generation sequencing has provided a wealth of plastid genome sequence data from an increasingly diverse set of green plants (Viridiplantae). Although these data have helped resolve the phylogeny of numerous...

    Authors: Brad R Ruhfel, Matthew A Gitzendanner, Pamela S Soltis, Douglas E Soltis and J Gordon Burleigh
    Citation: BMC Evolutionary Biology 2014 14:23
  4. Ferns are the only major lineage of vascular plants not represented by a sequenced nuclear genome. This lack of genome sequence information significantly impedes our ability to understand and reconstruct genom...

    Authors: Emily B Sessa, Jo Ann Banks, Michael S Barker, Joshua P Der, Aaron M Duffy, Sean W Graham, Mitsuyasu Hasebe, Jane Langdale, Fay-Wei Li, D Blaine Marchant, Kathleen M Pryer, Carl J Rothfels, Stanley J Roux, Mari L Salmi, Erin M Sigel, Douglas E Soltis…
    Citation: GigaScience 2014 3:15
  5. The 1,000 plants (1KP) project is an international multi-disciplinary consortium that has generated transcriptome data from over 1,000 plant species, with exemplars for all of the major lineages across the Viridi...

    Authors: Naim Matasci, Ling-Hong Hung, Zhixiang Yan, Eric J Carpenter, Norman J Wickett, Siavash Mirarab, Nam Nguyen, Tandy Warnow, Saravanaraj Ayyampalayam, Michael Barker, J Gordon Burleigh, Matthew A Gitzendanner, Eric Wafula, Joshua P Der, Claude W dePamphilis, Béatrice Roure…
    Citation: GigaScience 2014 3:17
  6. The endemic Hawaiian mints represent a major island radiation that likely originated from hybridization between two North American polyploid lineages. In contrast with the extensive morphological and ecologica...

    Authors: Charlotte Lindqvist, Anne-Cathrine Scheen, Mi-Jeong Yoo, Paris Grey, David G Oppenheimer, James H Leebens-Mack, Douglas E Soltis, Pamela S Soltis and Victor A Albert
    Citation: BMC Plant Biology 2006 6:16
  7. GSK3 (glycogen synthase kinase 3) genes encode signal transduction proteins with roles in a variety of biological processes in eukaryotes. In contrast to the low copy numbers observed in animals, GSK3 genes have ...

    Authors: Xinshuai Qi, André S Chanderbali, Gane Ka-Shu Wong, Douglas E Soltis and Pamela S Soltis
    Citation: BMC Evolutionary Biology 2013 13:143
  8. Flowering plants (angiosperms) are dominant components of global terrestrial ecosystems, but phylogenetic relationships at the familial level and above remain only partially resolved, greatly impeding our full...

    Authors: Hong-Tao Li, Yang Luo, Lu Gan, Peng-Fei Ma, Lian-Ming Gao, Jun-Bo Yang, Jie Cai, Matthew A. Gitzendanner, Peter W. Fritsch, Ting Zhang, Jian-Jun Jin, Chun-Xia Zeng, Hong Wang, Wen-Bin Yu, Rong Zhang, Michelle van der Bank…
    Citation: BMC Biology 2021 19:232
  9. The Floral Genome Project was initiated to bridge the genomic gap between the most broadly studied plant model systems. Arabidopsis and rice, although now completely sequenced and under intensive comparative geno...

    Authors: Victor A Albert, Douglas E Soltis, John E Carlson, William G Farmerie, P Kerr Wall, Daniel C Ilut, Teri M Solow, Lukas A Mueller, Lena L Landherr, Yi Hu, Matyas Buzgo, Sangtae Kim, Mi-Jeong Yoo, Michael W Frohlich, Rafael Perl-Treves, Scott E Schlarbaum…
    Citation: BMC Plant Biology 2005 5:5
  10. The nuclear genome sequence of Amborella trichopoda, the sister species to all other extant angiosperms, will be an exceptional resource for plant genomics.

    Authors: Douglas E Soltis, Victor A Albert, Jim Leebens-Mack, Jeffrey D Palmer, Rod A Wing, Claude W dePamphilis, Hong Ma, John E Carlson, Naomi Altman, Sangtae Kim, P Kerr Wall, Andrea Zuccolo and Pamela S Soltis
    Citation: Genome Biology 2008 9:402
  11. Recent phylogenetic analyses have identified Amborella trichopoda, an understory tree species endemic to the forests of New Caledonia, as sister to a clade including all other known flowering plant species. The A...

    Authors: Andrea Zuccolo, John E Bowers, James C Estill, Zhiyong Xiong, Meizhong Luo, Aswathy Sebastian, José Luis Goicoechea, Kristi Collura, Yeisoo Yu, Yuannian Jiao, Jill Duarte, Haibao Tang, Saravanaraj Ayyampalayam, Steve Rounsley, Dave Kudrna, Andrew H Paterson…
    Citation: Genome Biology 2011 12:R48
  12. Incarvillea sinensis is widely distributed from Southwest China to Northeast China and in the Russian Far East. The distribution of this species was thought to be influenced by the uplift of the Qinghai-Tibet Pla...

    Authors: Shaotian Chen, Yaowu Xing, Tao Su, Zhekun Zhou, Emeritus David L Dilcher and Douglas E Soltis
    Citation: BMC Plant Biology 2012 12:58
  13. Hybridization coupled with whole-genome duplication (allopolyploidy) leads to a variety of genetic and epigenetic modifications in the resultant merged genomes. In particular, gene loss and gene silencing are ...

    Authors: Tina Sehrish, V Vaughan Symonds, Douglas E Soltis, Pamela S Soltis and Jennifer A Tate
    Citation: BMC Genomics 2014 15:701
  14. The Norway spruce genome provides key insights into the evolution of plant genomes, leading to testable new hypotheses about conifer, gymnosperm, and vascular plant evolution.

    Authors: Pamela S Soltis and Douglas E Soltis
    Citation: Genome Biology 2013 14:122
  15. We have developed a simulation approach to help determine the optimal mixture of sequencing methods for most complete and cost effective transcriptome sequencing. We compared simulation results for traditional...

    Authors: P Kerr Wall, Jim Leebens-Mack, André S Chanderbali, Abdelali Barakat, Erik Wolcott, Haiying Liang, Lena Landherr, Lynn P Tomsho, Yi Hu, John E Carlson, Hong Ma, Stephan C Schuster, Douglas E Soltis, Pamela S Soltis, Naomi Altman and Claude W dePamphilis
    Citation: BMC Genomics 2009 10:347
  16. The glycogen synthase kinase 3 (GSK3)/SHAGGY-like kinases (GSKs) are non-receptor serine/threonine protein kinases that are involved in a variety of biological processes. In contrast to the two members of the GSK...

    Authors: Mi-Jeong Yoo, Victor A Albert, Pamela S Soltis and Douglas E Soltis
    Citation: BMC Plant Biology 2006 6:3
  17. Although it is agreed that a major polyploidy event, gamma, occurred within the eudicots, the phylogenetic placement of the event remains unclear.

    Authors: Yuannian Jiao, Jim Leebens-Mack, Saravanaraj Ayyampalayam, John E Bowers, Michael R McKain, Joel McNeal, Megan Rolf, Daniel R Ruzicka, Eric Wafula, Norman J Wickett, Xiaolei Wu, Yong Zhang, Jun Wang, Yeting Zhang, Eric J Carpenter, Michael K Deyholos…
    Citation: Genome Biology 2012 13:R3
  18. Plastid genome sequence information is vital to several disciplines in plant biology, including phylogenetics and molecular biology. The past five years have witnessed a dramatic increase in the number of comp...

    Authors: Michael J Moore, Amit Dhingra, Pamela S Soltis, Regina Shaw, William G Farmerie, Kevin M Folta and Douglas E Soltis
    Citation: BMC Plant Biology 2006 6:17
  19. Epilithic sister genera Oresitrophe and Mukdenia (Saxifragaceae) have an epilithic habitat (rocky slopes) and a parapatric distribution in East Asia, which makes them an ideal model for a more comprehensive under...

    Authors: Luxian Liu, Yuewen Wang, Peizi He, Pan Li, Joongku Lee, Douglas E. Soltis and Chengxin Fu
    Citation: BMC Genomics 2018 19:235