Plant organ segmentation from 3D point clouds is a relevant task for plant phenotyping and plant growth observation. Automated solutions are required to increase the efficiency of recent high-throughput plant ...
3D Cell Segmentation and Quantitative Profiling: Methods and Applications
Citation: BMC Bioinformatics 2015 16:248
WormGUIDES: an interactive single cell developmental atlas and tool for collaborative multidimensional data exploration
Imaging and image analysis advances are yielding increasingly complete and complicated records of cellular events in tissues and whole embryos. The ability to follow hundreds to thousands of cells at the indiv...Citation: BMC Bioinformatics 2015 16:189
Robust and automated three-dimensional segmentation of densely packed cell nuclei in different biological specimens with Lines-of-Sight decomposition
Due to the large amount of data produced by advanced microscopy, automated image analysis is crucial in modern biology. Most applications require reliable cell nuclei segmentation. However, in many biological ...Citation: BMC Bioinformatics 2015 16:187
The subcellular distribution of synapses is fundamentally important for the assembly, function, and plasticity of the nervous system. Automated and effective quantification tools are a prerequisite to large-sc...Citation: BMC Bioinformatics 2015 16:177