All
1.
Q&A: Antibiotic resistance: what more do we know and what more can we do?
Gerard D Wright BMC Biology 2013, 11 :51 (17 May 2013)
Full text | PDF | PubMed
|
Editor’s summary
Antibiotic resistance is both an ancient phenomenon and a worsening medical problem. Gerard Wright explains why, and what should be done about it.
2.
Salmonella enterica Typhimurium infection causes metabolic changes in chicken muscle involving AMPK, fatty acid and insulin/mTOR signaling
Ryan J Arsenault, Scott Napper, Michael H Kogut Veterinary Research 2013, 44 :35 (17 May 2013)
Abstract | Provisional PDF
| PubMed
3.
Population structure of the fish pathogen Flavobacterium psychrophilum at whole-country and model river levels in Japan
Erina Fujiwara-Nagata, Céline Chantry-Darmon, Jean-François Bernardet, Mitsuru Eguchi, Eric Duchaud, Pierre Nicolas Veterinary Research 2013, 44 :34 (17 May 2013)
Abstract | Full text | PDF | PubMed
4.
Major historical dietary changes are reflected in the dental microbiome of ancient skeletons
Antti Sajantila Investigative Genetics 2013, 4 :10 (17 May 2013)
Abstract | Provisional PDF
| PubMed
5.
Catabolic flexibility of mammalian-associated lactobacilli
Michelle M O¿Donnell, Paul W O¿Toole, Reynolds Paul Ross Microbial Cell Factories 2013, 12 :48 (16 May 2013)
Abstract | Provisional PDF
| PubMed
6.
Co-occurrence of anaerobic bacteria in colorectal carcinomas
René L Warren, Douglas J Freeman, Stephen Pleasance, Peter Watson, Richard A Moore, Kyla Cochrane, Emma Allen-Vercoe, Robert A Holt Microbiome 2013, 1 :16 (15 May 2013)
Abstract | Provisional PDF
7.
The effects of intestinal microbial community structure on disease manifestation in IL-10-/- mice infected with Helicobacter hepaticus
Nabeetha A Nagalingam, Courtney J Robinson, Ingrid L Bergin, Kathryn A Eaton, Gary B Huffnagle, Vincent B Young Microbiome 2013, 1 :15 (10 May 2013)
Abstract | Provisional PDF
8.
Effects of NS lactobacillus strains on lipid metabolism of rats fed a high-cholesterol diet
Xu Hu, Tao Wang, Wei Li, Feng Jin, Li Wang Lipids in Health and Disease 2013, 12 :67 (9 May 2013)
Abstract | Provisional PDF
| PubMed
9.
Transglucosidase improves the gut microbiota profile of type 2 diabetes mellitus patients: a randomized double-blind, placebo-controlled study
Makoto Sasaki, Naotaka Ogasawara, Yasushi Funaki, Mari Mizuno, Akihito Iida, Chiho Goto, Satoshi Koikeda, Kunio Kasugai, Takashi Joh BMC Gastroenterology 2013, 13 :81 (8 May 2013)
Abstract | Full text | PDF | PubMed
10.
The microbiome of chronic rhinosinusitis: culture, molecular diagnostics and biofilm detection
Sam Boase, Andrew Foreman, Edward Cleland, Lorwai Tan, Rachel Melton-Kreft, Harshita Pant, Fen Z Hu, Garth D Ehrlich, Peter-John Wormald BMC Infectious Diseases 2013, 13 :210 (8 May 2013)
Abstract | Full text | PDF | ePUB | PubMed
11.
Sex differences matter in the gut: effect on mucosal immune activation and inflammation
Sumathi Sankaran-Walters, Monica Macal, Irina Grishina, Lauren Nagy, Larissa Goulart, Kathryn Coolidge, Jay Li, Anne Fenton, Theodore Williams, Mary K Miller, Jason Flamm, Thomas Prindiville, Michael George, Satya Dandekar Biology of Sex Differences 2013, 4 :10 (7 May 2013)
Abstract | Full text | PDF | ePUB | PubMed
12.
After the gold rush
Neil Hall Genome Biology 2013, 14 :115 (7 May 2013)
Abstract | Full text | PDF | PubMed
|
Editor’s summary
Neil Hall wonders whether genomics is ready for a plateau in sequencing costs
13.
From meta-omics to causality: experimental models for human microbiome research
Joëlle V Fritz, Mahesh S Desai, Pranjul Shah, Jochen G Schneider, Paul Wilmes Microbiome 2013, 1 :14 (3 May 2013)
Abstract | Full text | PDF | ePUB
14.
Oligofructose supplementation (10%) during pregnancy and lactation does not change the inflammatory effect of concurrent trans fatty acid ingestion on 21-day-old offspring
Ana Claudia Losinskas Hachul, Laís Vales Mennitti, Juliana Lopes de Oliveira, Mayara Franzoi Moreno, Marcos Hiromu Okuda, Bruno dos Santos, Lila Missae Oyama, Eliane Beraldi Ribeiro, Claudia Maria Oller do Nascimento, Luciana Pellegrini Pisani Lipids in Health and Disease 2013, 12 :59 (1 May 2013)
Abstract | Full text | PDF | ePUB | PubMed
15.
Differences in gut microbiota composition between obese and lean children: a cross-sectional study
Liene Bervoets, Kim Van Hoorenbeeck, Ineke Kortleven, Caroline Van Noten, Niel Hens, Carl Vael, Herman Goossens, Kristine N Desager, Vanessa Vankerckhoven Gut Pathogens 2013, 5 :10 (30 April 2013)
Abstract | Full text | PDF | PubMed
16.
CRISPR-Cas systems target a diverse collection of invasive mobile genetic elements in human microbiomes
Quan Zhang, Mina Rho, Haixu Tang, Thomas G Doak, Yuzhen Ye Genome Biology 2013, 14 :R40 (29 April 2013)
Abstract | Provisional PDF
| PubMed
|
Editor’s summary
Analysis of CRISPR sequences contained in human metagenomic datasets reveals a variety of different targeted mobile genetic elements
17.
Unravelling the impact of ethnicity on health in Europe: the HELIUS study
Karien Stronks, Marieke B Snijder, Ron JG Peters, Maria Prins, Aart H Schene, Aeilko H Zwinderman BMC Public Health 2013, 13 :402 (27 April 2013)
Abstract | Full text | PDF | ePUB | PubMed
18.
Lactobacillus species isolated from vaginal secretions of healthy and bacterial vaginosis-intermediate Mexican women: a prospective study
Marcos Daniel Martínez-Peña, Graciela Castro-Escarpulli, Ma Guadalupe Aguilera-Arreola BMC Infectious Diseases 2013, 13 :189 (26 April 2013)
Abstract | Full text | PDF | ePUB | PubMed
19.
Compression-based distance (CBD): a simple, rapid, and accurate method for microbiota composition comparison
Fang Yang, Nicholas Chia, Bryan A White, Lawrence B Schook BMC Bioinformatics 2013, 14 :136 (23 April 2013)
Abstract | Full text | PDF | PubMed
20.
Infant gut microbiota and the hygiene hypothesis of allergic disease: impact of household pets and siblings on microbiota composition and diversity
Meghan B Azad, Theodore Konya, Heather Maughan, David S Guttman, Catherine J Field, Malcolm R Sears, Allan B Becker, James A Scott, Anita L Kozyrskyj, CHILD Study Investigators Allergy, Asthma & Clinical Immunology 2013, 9 :15 (22 April 2013)
Abstract | Full text | PDF | ePUB | PubMed
|
Editor’s summary
Exposure to pets or siblings differentially affect infant gut microbiota, calling into question the clinical significance of these two traditionally protective "hygiene hypothesis" factors in allergic disease.
21.
Microbial genomics: an increasingly revealing interface in human health and disease
Martin L Hibberd Genome Medicine 2013, 5 :31 (18 April 2013)
Abstract | Full text | PDF | PubMed
|
Editor’s summary
Guest Editor Martin Hibberd highlights advances in genomics, metagenomics and other high-throughput approaches for studying human-microbe interactions in health and disease, and the applications for medicine.
22.
Biotechnological potential of rhizobial metabolites to enhance the performance of Bradyrhizobium spp. and Azospirillum brasilense inoculants with soybean and maize
Bettina Berquó Marks, Manuel Megías, Marco Antonio Nogueira, Mariangela Hungria AMB Express 2013, 3 :21 (17 April 2013)
Abstract | Full text | PDF | ePUB | PubMed | F1000 Biology
23.
Early microbial and metabolomic signatures predict later onset of necrotizing enterocolitis in preterm infants
Ardythe L Morrow, Anne J Lagomarcino, Kurt R Schibler, Diana H Taft, Zhuoteng Yu, Bo Wang, Mekibib Altaye, Michael Wagner, Dirk Gevers, Doyle V Ward, Michael A Kennedy, Curtis Huttenhower, David S Newburg Microbiome 2013, 1 :13 (16 April 2013)
Abstract | Full text | PDF | ePUB
|
Editor’s summary
Abnormal gut bacteria in premature babies was found days before the onset of necrotizing enterocolitis and could also be determined indirectly from urine, providing a possible biomarker for disease.
24.
A decadal view of biodiversity informatics: challenges and priorities
Alex Hardisty, Dave Roberts, The Biodiversity Informatics Community BMC Ecology 2013, 13 :16 (15 April 2013)
Abstract | Full text | PDF | ePUB | PubMed
|
Editor’s summary
Alex Hardisty and Dave Roberts outline a grand vision for the future of biodiversity research that is based on a fully integrated e-infrastructure, following a huge community consultation effort with the Biodiversity Informatics Community.
25.
Comparative meta-RNA-seq of the vaginal microbiota and differential expression by Lactobacillus iners in health and dysbiosis
Jean M Macklaim, Andrew D Fernandes, Julia M Di Bella, Jo-Anne Hammond, Gregor Reid, Gregory B Gloor Microbiome 2013, 1 :12 (12 April 2013)
Abstract | Full text | PDF | ePUB