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Statistical issues in the analysis of Illumina data.
Dunning MJ, Barbosa-Morais NL, Lynch AG, Tavaré S, Ritchie ME
BMC Bioinformatics 2008, 9:85
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Spike-in validation of an Illumina-specific variance stabilizing transformation
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On the necessity of different statistical treatment for Illumina BeadChip and Affymetrix GeneChip data and its significance for biological interpretation
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