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Tilescope: online analysis pipeline for high-density tiling microarray data.
Zhang ZD, Rozowsky J, Lam HY, Du J, Snyder M, Gerstein M
Genome Biol
2007,
8
:R81
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PubMed Central articles that cite the above article:
1.
Getting started in tiling microarray analysis.
Liu XS
PLoS Comput Biol
2007 Oct,
3
:1842-4
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Systematic evaluation of variability in ChIP-chip experiments using predefined DNA targets.
Johnson DS, Li W, Gordon DB, Bhattacharjee A, Curry B, Ghosh J, Brizuela L, Carroll JS, Brown M, Flicek P, Koch CM, Dunham I, Bieda M, Xu X, Farnham PJ, Kapranov P, Nix DA, Gingeras TR, Zhang X, Holster H, Jiang N, Green RD, Song JS, McCuine SA, Anton E, Nguyen L, Trinklein ND, Ye Z, Ching K, Hawkins D, Ren B, Scacheri PC, Rozowsky J, Karpikov A, Euskirchen G, Weissman S, Gerstein M, Snyder M, Yang A, Moqtaderi Z, Hirsch H, Shulha HP, Fu Y, Weng Z, Struhl K, Myers RM, Lieb JD, Liu XS
Genome Res
2008 Mar,
18
:393-403
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A genomic analysis of RNA polymerase II modification and chromatin architecture related to 3' end RNA polyadenylation.
Lian Z, Karpikov A, Lian J, Mahajan MC, Hartman S, Gerstein M, Snyder M, Weissman SM
Genome Res
2008 Aug,
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Modeling ChIP sequencing in silico with applications.
Zhang ZD, Rozowsky J, Snyder M, Chang J, Gerstein M
PLoS Comput Biol
2008,
4
:e1000158
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