Log on / register
Feedback | Support | My details
Quantifying similarity between motifs.
Gupta S, Stamatoyannopoulos JA, Bailey TL, Noble WS
Genome Biol 2007, 8:R24
[Full text] [PubMed] [Related articles] [Cited on BioMed Central]


printer friendly 
to  [Help]

PubMed Central articles that cite the above article:

1.
Reliable prediction of regulator targets using 12 Drosophila genomes.
Kheradpour P, Stark A, Roy S, Kellis M
Genome Res 2007 Dec, 17:1919-31
[PubMed Central] [PubMed] [Related articles]

2.
A novel Bayesian DNA motif comparison method for clustering and retrieval.
Habib N, Kaplan T, Margalit H, Friedman N
PLoS Comput Biol 2008 Feb, 4:e1000010
[PubMed Central] [PubMed] [Related articles]

3.
Yeast translational response to high salinity: global analysis reveals regulation at multiple levels.
Melamed D, Pnueli L, Arava Y
RNA 2008 Jul, 14:1337-51
[PubMed Central] [PubMed] [Related articles]

4.
Position-dependent motif characterization using non-negative matrix factorization.
Hutchins LN, Murphy SM, Singh P, Graber JH
Bioinformatics 2008 Dec 1, 24:2684-90
[PubMed Central] [PubMed] [Related articles]

5.
Pseudocounts for transcription factor binding sites.
Nishida K, Frith MC, Nakai K
Nucleic Acids Res 2009 Feb, 37:939-44
[PubMed Central] [PubMed] [Related articles]

6.
UniPROBE: an online database of protein binding microarray data on protein-DNA interactions.
Newburger DE, Bulyk ML
Nucleic Acids Res 2009 Jan, 37:D77-82
[PubMed Central] [PubMed] [Related articles]

7.
Genome-wide de novo prediction of cis-regulatory binding sites in prokaryotes.
Zhang S, Xu M, Li S, Su Z
Nucleic Acids Res 2009 Jun, 37:e72
[PubMed Central] [PubMed] [Related articles]

8.
MEME SUITE: tools for motif discovery and searching.
Bailey TL, Boden M, Buske FA, Frith M, Grant CE, Clementi L, Ren J, Li WW, Noble WS
Nucleic Acids Res 2009 Jul 1, 37:W202-8
[PubMed Central] [PubMed] [Related articles]

9.
Discovery of protein-DNA interactions by penalized multivariate regression.
Zamdborg L, Ma P
Nucleic Acids Res 2009 Sep, 37:5246-54
[PubMed Central] [PubMed] [Related articles]

10.
Exhaustive search for over-represented DNA sequence motifs with CisFinder.
Sharov AA, Ko MS
DNA Res 2009 Oct, 16:261-73
[PubMed Central] [PubMed] [Related articles]


This article is also cited by 3 articles in BioMed Central


You can also check ISI Web of Science for additional citations (subscription required)
printer friendly 
to  [Help]

© 1999-2009 BioMed Central Ltd unless otherwise stated. Part of Springer Science+Business Media.