Log on / register
Feedback | Support | My details
How complete are current yeast and human protein-interaction networks?
Hart GT, Ramani AK, Marcotte EM
Genome Biol 2006, 7:120
[Full text] [PubMed] [Related articles] [Cited on BioMed Central]


printer friendly 
to  [Help]

PubMed Central articles that cite the above article:

1.
Characterization of protein hubs by inferring interacting motifs from protein interactions.
Aragues R, Sali A, Bonet J, Marti-Renom MA, Oliva B
PLoS Comput Biol 2007 Sep, 3:1761-71
 [PubMed Central] [PubMed] [Related articles]
2.
*** Unable to retrieve article 17941705 ***

 [PubMed Central] [PubMed] [Related articles]
3.
Where have all the interactions gone? Estimating the coverage of two-hybrid protein interaction maps.
Huang H, Jedynak BM, Bader JS
PLoS Comput Biol 2007 Nov, 3:e214
 [PubMed Central] [PubMed] [Related articles]
4.
*** Unable to retrieve article 18039026 ***

 [PubMed Central] [PubMed] [Related articles]
5.
Host pathogen protein interactions predicted by comparative modeling.
Davis FP, Barkan DT, Eswar N, McKerrow JH, Sali A
Protein Sci 2007 Dec, 16:2585-96
 [PubMed Central] [PubMed] [Related articles]
6.
Genome-wide inference of protein interaction sites: lessons from the yeast high-quality negative protein-protein interaction dataset.
Guo J, Wu X, Zhang DY, Lin K
Nucleic Acids Res 2008 Apr, 36:2002-11
 [PubMed Central] [PubMed] [Related articles]
7.
Estimating the size of the human interactome.
Stumpf MP, Thorne T, de Silva E, Stewart R, An HJ, Lappe M, Wiuf C
Proc Natl Acad Sci U S A 2008 May 13, 105:6959-64
 [PubMed Central] [PubMed] [Related articles]
8.
A map of human protein interactions derived from co-expression of human mRNAs and their orthologs.
Ramani AK, Li Z, Hart GT, Carlson MW, Boutz DR, Marcotte EM
Mol Syst Biol 2008, 4:180
 [PubMed Central] [PubMed] [Related articles]
9.
Walking the interactome for prioritization of candidate disease genes.
Köhler S, Bauer S, Horn D, Robinson PN
Am J Hum Genet 2008 Apr, 82:949-58
 [PubMed Central] [PubMed] [Related articles]
10.
Predicting and validating protein interactions using network structure.
Chen PY, Deane CM, Reinert G
PLoS Comput Biol 2008, 4:e1000118
 [PubMed Central] [PubMed] [Related articles]
11.
Global investigation of protein-protein interactions in yeast Saccharomyces cerevisiae using re-occurring short polypeptide sequences.
Pitre S, North C, Alamgir M, Jessulat M, Chan A, Luo X, Green JR, Dumontier M, Dehne F, Golshani A
Nucleic Acids Res 2008 Aug, 36:4286-94
 [PubMed Central] [PubMed] [Related articles]
12.
Resolving the network of cell signaling pathways using the evolving yeast two-hybrid system.
Ratushny V, Golemis E
Biotechniques 2008 Apr, 44:655-62
 [PubMed Central] [PubMed] [Related articles]
13.
Cost-effective strategies for completing the interactome.
Schwartz AS, Yu J, Gardenour KR, Finley RL, Ideker T
Nat Methods 2009 Jan, 6:55-61
 [PubMed Central] [PubMed] [Related articles]
14.
Precision and recall estimates for two-hybrid screens.
Huang H, Bader JS
Bioinformatics 2009 Feb 1, 25:372-8
 [PubMed Central] [PubMed] [Related articles]
15.
An integrated workflow for charting the human interaction proteome: insights into the PP2A system.
Glatter T, Wepf A, Aebersold R, Gstaiger M
Mol Syst Biol 2009, 5:237
 [PubMed Central] [PubMed] [Related articles]
16.
On the growth of scientific knowledge: yeast biology as a case study.
He X, Zhang J
PLoS Comput Biol 2009 Mar, 5:e1000320
 [PubMed Central] [PubMed] [Related articles]
17.
Tissue specificity and the human protein interaction network.
Bossi A, Lehner B
Mol Syst Biol 2009, 5:260
 [PubMed Central] [PubMed] [Related articles]
18.
POLAR MAPPER: a computational tool for integrated visualization of protein interaction networks and mRNA expression data.
Gonçalves JP, Grãos M, Valente AX
J R Soc Interface 2009 Oct 6, 6:881-96
 [PubMed Central] [PubMed] [Related articles]
19.
PIPs: human protein-protein interaction prediction database.
McDowall MD, Scott MS, Barton GJ
Nucleic Acids Res 2009 Jan, 37:D651-6
 [PubMed Central] [PubMed] [Related articles]
20.
ConsensusPathDB--a database for integrating human functional interaction networks.
Kamburov A, Wierling C, Lehrach H, Herwig R
Nucleic Acids Res 2009 Jan, 37:D623-8
 [PubMed Central] [PubMed] [Related articles]
21.
COFECO: composite function annotation enriched by protein complex data.
Sun CH, Kim MS, Han Y, Yi GS
Nucleic Acids Res 2009 Jul 1, 37:W350-5
 [PubMed Central] [PubMed] [Related articles]
22.
Geometric de-noising of protein-protein interaction networks.
Kuchaiev O, Rasajski M, Higham DJ, Przulj N
PLoS Comput Biol 2009 Aug, 5:e1000454
 [PubMed Central] [PubMed] [Related articles]
23.
Pushing structural information into the yeast interactome by high-throughput protein docking experiments.
Mosca R, Pons C, Fernández-Recio J, Aloy P
PLoS Comput Biol 2009 Aug, 5:e1000490
 [PubMed Central] [PubMed] [Related articles]
24.
Evolutionarily conserved herpesviral protein interaction networks.
Fossum E, Friedel CC, Rajagopala SV, Titz B, Baiker A, Schmidt T, Kraus T, Stellberger T, Rutenberg C, Suthram S, Bandyopadhyay S, Rose D, von Brunn A, Uhlmann M, Zeretzke C, Dong YA, Boulet H, Koegl M, Bailer SM, Koszinowski U, Ideker T, Uetz P, Zimmer R, Haas J
PLoS Pathog 2009 Sep, 5:e1000570
 [PubMed Central] [PubMed] [Related articles]
25.
Network-assisted protein identification and data interpretation in shotgun proteomics.
Li J, Zimmerman LJ, Park BH, Tabb DL, Liebler DC, Zhang B
Mol Syst Biol 2009, 5:303
 [PubMed Central] [PubMed] [Related articles]
26.
Functionally guided alignment of protein interaction networks for module detection.
Ali W, Deane CM
Bioinformatics 2009 Dec 1, 25:3166-73
 [PubMed Central] [PubMed] [Related articles]

This article is also cited by 15 articles in BioMed Central


You can also check ISI Web of Science for additional citations (subscription required)
  
printer friendly 
to  [Help]
Terms and Conditions Privacy statement Information for advertisers Jobs at BMC Contact us
© 1999-2009 BioMed Central Ltd unless otherwise stated. Part of Springer Science+Business Media.